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onboarding_affiliates [2016/04/20 11:33] jmbanda [How to connect to DB1] |
onboarding_affiliates [2018/06/01 09:53] cmiko [Onboarding steps] |
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====== Onboarding for affiliates ====== | ====== Onboarding for affiliates ====== | ||
===== Onboarding steps ===== | ===== Onboarding steps ===== | ||
- | | + | |
- | - Get access to our [[int: | + | |
- | - Identify the [[int: | + | - Get access to our servers. Contact |
- | - Complete training (HIPAA awareness on Axess, Protection of Human Subjects | + | - Identify the [[:int: |
- | - Understand our [[int:clinical_study|clinical study workflow]] and [[int:annotation| annotation workflow]] | + | - Complete |
- | - You are encouraged | + | - IF you will access data containing PHI (e.g. clinical notes), you need to complete the following training: |
- | - For details regarding specific | + | - Protecting Patient Privacy - sign up via [[https:// |
- | * Server access: | + | - Protection of Human Subjects |
- | * Data use agreement: Nigam Shah | + | - IF you will access ONLY de-identified patient data, you need to complete the following training: |
- | * Text processing: | + | - Protecting Patient Privacy - sign up via [[https:// |
- | * Cohort building: | + | - Upload your certificates at: [[http:// |
- | * [[int: | + | - Get on the right mailing list |
- | * Patient matching | + | - Find the person in the lab who can explain the data you will use - talk to them! |
- | * Data analysis: | + | - Set up a wiki page to document your project. [[:int:callahan: |
+ | - For details regarding specific | ||
+ | * Server access: | ||
+ | * Data use agreement: Nigam Shah | ||
+ | * Text processing: | ||
+ | * Data/ | ||
===== Data sharing and Use Agreement ===== | ===== Data sharing and Use Agreement ===== | ||
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===== How to connect to Dev2 ====== | ===== How to connect to Dev2 ====== | ||
If you are off-campus (or on the wireless network), you will need [[https:// | If you are off-campus (or on the wireless network), you will need [[https:// | ||
- | Not to be confused with DB1, this only needs a simple | + | SSH command to connect (open a terminal): |
< | < | ||
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There are multiple different ways of connecting to the database server. If you are off-campus, you will need [[https:// | There are multiple different ways of connecting to the database server. If you are off-campus, you will need [[https:// | ||
- | NOTE: Your DB1 password is NOT the same as your dev2 password. It is found on the .my.cnf file on your home/ | + | **NOTE: Your DB1 password is NOT the same as your dev2 password. It is found on the .my.cnf |
1) (The easiest way) Set up a MySQL GUI:\\ | 1) (The easiest way) Set up a MySQL GUI:\\ |