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omop_cdm_bigquery_to_postgress_extraction [2020/10/11 12:55]
podalv |
omop_cdm_bigquery_to_postgress_extraction [2021/01/27 09:18]
podalv |
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| <code> | <code> |
| psql -h ohdsi.shahlab.stanford.edu -p 5432 -d starr_omop_cdm_20200404 -U achilles | psql -h ohdsi.shahlab.stanford.edu -p 5432 -d starr_omop_cdm_20200620 -U achilles |
| create database starr_omop_cdm_20200404; | create database starr_omop_cdm_20200404; |
| \q | \q |
| create table fact_relationship(domain_concept_id_1 bigint not null,fact_id_1 bigint not null,domain_concept_id_2 bigint not null,fact_id_2 bigint not null,relationship_concept_id bigint not null,trace_id varchar,unit_id varchar,load_table_id varchar); | create table fact_relationship(domain_concept_id_1 bigint not null,fact_id_1 bigint not null,domain_concept_id_2 bigint not null,fact_id_2 bigint not null,relationship_concept_id bigint not null,trace_id varchar,unit_id varchar,load_table_id varchar); |
| create table location(location_id bigint not null,address_1 varchar,address_2 varchar,city varchar,state varchar,zip varchar,county varchar,location_source_value varchar,unit_id varchar,load_table_id varchar); | create table location(location_id bigint not null,address_1 varchar,address_2 varchar,city varchar,state varchar,zip varchar,county varchar,location_source_value varchar,unit_id varchar,load_table_id varchar); |
| create table measurement(measurement_id bigint not null,person_id bigint,measurement_concept_id bigint not null,measurement_DATE date not null,measurement_DATETIME timestamp,measurement_time varchar,measurement_type_concept_id bigint not null,operator_concept_id bigint not null,value_as_number decimal,value_as_concept_id bigint,unit_concept_id bigint,range_low decimal,range_high decimal,provider_id bigint,visit_occurrence_id bigint,visit_detail_id bigint,measurement_source_value varchar,measurement_source_concept_id bigint,unit_source_value varchar,value_source_value varchar,trace_id varchar,unit_id varchar,load_table_id varchar); | create table measurement(measurement_id bigint not null,person_id bigint,measurement_concept_id bigint not null,measurement_DATE date not null,measurement_DATETIME timestamp,measurement_time varchar,measurement_type_concept_id bigint not null,operator_concept_id bigint,value_as_number decimal,value_as_concept_id bigint,unit_concept_id bigint,range_low decimal,range_high decimal,provider_id bigint,visit_occurrence_id bigint,visit_detail_id bigint,measurement_source_value varchar,measurement_source_concept_id bigint,unit_source_value varchar,value_source_value varchar,trace_id varchar,unit_id varchar,load_table_id varchar); |
| create table metadata(metadata_concept_id bigint not null,metadata_type_concept_id bigint not null,name varchar not null,value_as_string varchar,value_as_concept_id bigint,metadata_DATE date,metadata_DATETIME timestamp,unit_id varchar,load_table_id varchar); | create table metadata(metadata_concept_id bigint not null,metadata_type_concept_id bigint not null,name varchar not null,value_as_string varchar,value_as_concept_id bigint,metadata_DATE date,metadata_DATETIME timestamp,unit_id varchar,load_table_id varchar); |
| create table note(note_id bigint not null,person_id bigint not null, note_DATE date, note_DATETIME timestamp, note_type_concept_id bigint, note_class_concept_id bigint, note_title varchar(250), note_text TEXT, encoding_concept_id bigint, language_concept_id bigint, provider_id int, visit_occurrence_id bigint,visit_detail_id bigint, note_source_value bigint); | create table note(note_id bigint not null,person_id bigint not null, note_DATE date, note_DATETIME timestamp, note_type_concept_id bigint, note_class_concept_id bigint, note_title varchar(250), note_text TEXT, encoding_concept_id bigint, language_concept_id bigint, provider_id int, visit_occurrence_id bigint,visit_detail_id bigint, note_source_value bigint); |
